Diagram of a replicated and condensed metaphase
eukaryotic chromosome. (1) Chromatid
– one of the two identical parts of the chromosome after S phase
. (2) Centromere
– the point where the two chromatids touch. (3) Short (p) arm. (4) Long (q) arm.
A chromosome (from ancient Greek: χρωμόσωμα, chromosoma, chroma means color, soma means body) is a DNA molecule with part or all of the genetic material (genome) of an organism. Most eukaryotic chromosomes include packaging proteins which, aided by chaperone proteins, bind to and condens the DNA molecule to prevent the DNA from becoming an unmanageable tangle.
Chromosomes are normally visible under a light microscope only when the cell is undergoing the metaphase of cell division. Before this happens, every chromosome is copied once (S phase), and the copy is joined to the original by a centromere, resulting either in an X-shaped structure (pictured to the right) if the centromere is located in the middle of the chromosome or a two-arm structure if the centromere is located near one of the ends. The original chromosome and the copy are now called sister chromatids. During metaphase the X-shape structure is called a metaphase chromosome. In this highly condensed form chromosomes are easiest to distinguish and study. In animal cells, chromosomes reach their highest compaction level in anaphase during segregation.
Chromosomal recombination during meiosis and subsequent sexual reproduction play a significant role in genetic diversity. If these structures are manipulated incorrectly, through processes known as chromosomal instability and translocation, the cell may undergo mitotic catastrophe and die, or it may unexpectedly evade apoptosis, leading to the progression of cancer.
Some use the term chromosome in a wider sense, to refer to the individualized portions of chromatin in cells, either visible or not under light microscopy. However, others use the concept in a narrower sense, to refer to the individualized portions of chromatin during cell division, visible under light microscopy due to high condensation.
The word chromosome () comes from the Greek χρῶμα (chroma, "colour") and σῶμα (soma, "body"), describing their strong staining by particular dyes. The term was coined by von Waldeyer-Hartz, referring to the term chromatin, which was introduced by Walther Flemming.
Emilio Battaglia (1917-2011) points out that over time many of the most familiar caryological terms have become inadequate or illogical or, in some cases, etymologically incorrect so that they should be replaced by more adequate alternatives suggested by the present scientific progress. The author has been particularly disappointed by the illogicality of the present chromosomal (chromatin-chromosome) terminology based on, or inferred by, two terms, Chromatin (Flemming 1880) and Chromosom (Waldeyer 1888), both inappropriately ascribed to a basically non coloured state.
History of discovery
Schleiden, Virchow and Bütschli were among the first scientists who recognized the structures now familiar as chromosomes.
In a series of experiments beginning in the mid-1880s, Theodor Boveri gave the definitive demonstration that chromosomes are the vectors of heredity. His two principles were the continuity of chromosomes and the individuality of chromosomes. It is the second of these principles that was so original. Wilhelm Roux suggested that each chromosome carries a different genetic load. Boveri was able to test and confirm this hypothesis. Aided by the rediscovery at the start of the 1900s of Gregor Mendel's earlier work, Boveri was able to point out the connection between the rules of inheritance and the behaviour of the chromosomes. Boveri influenced two generations of American cytologists: Edmund Beecher Wilson, Nettie Stevens, Walter Sutton and Theophilus Painter were all influenced by Boveri (Wilson, Stevens, and Painter actually worked with him).
In his famous textbook The Cell in Development and Heredity, Wilson linked together the independent work of Boveri and Sutton (both around 1902) by naming the chromosome theory of inheritance the Boveri–Sutton chromosome theory (the names are sometimes reversed). Ernst Mayr remarks that the theory was hotly contested by some famous geneticists: William Bateson, Wilhelm Johannsen, Richard Goldschmidt and T.H. Morgan, all of a rather dogmatic turn of mind. Eventually, complete proof came from chromosome maps in Morgan's own lab.
The number of human chromosomes was published in 1923 by Theophilus Painter. By inspection through the microscope, he counted 24 pairs, which would mean 48 chromosomes. His error was copied by others and it was not until 1956 that the true number, 46, was determined by Indonesia-born cytogeneticist Joe Hin Tjio.
The prokaryotes – bacteria and archaea – typically have a single circular chromosome, but many variations exist. The chromosomes of most bacteria, which some authors prefer to call genophores, can range in size from only 130,000 base pairs in the endosymbiotic bacteria Candidatus Hodgkinia cicadicola and Candidatus Tremblaya princeps, to more than 14,000,000 base pairs in the soil-dwelling bacterium Sorangium cellulosum. Spirochaetes of the genus Borrelia are a notable exception to this arrangement, with bacteria such as Borrelia burgdorferi, the cause of Lyme disease, containing a single linear chromosome.
Structure in sequences
Prokaryotic chromosomes have less sequence-based structure than eukaryotes. Bacteria typically have a one-point (the origin of replication) from which replication starts, whereas some archaea contain multiple replication origins. The genes in prokaryotes are often organized in operons, and do not usually contain introns, unlike eukaryotes.
Prokaryotes do not possess nuclei. Instead, their DNA is organized into a structure called the nucleoid. The nucleoid is a distinct structure and occupies a defined region of the bacterial cell. This structure is, however, dynamic and is maintained and remodeled by the actions of a range of histone-like proteins, which associate with the bacterial chromosome. In archaea, the DNA in chromosomes is even more organized, with the DNA packaged within structures similar to eukaryotic nucleosomes.
Certain bacteria also contain plasmids or other extrachromosomal DNA. These are circular structures in the cytoplasm that contain cellular DNA and play a role in horizontal gene transfer. In prokaryotes (see nucleoids) and viruses, the DNA is often densely packed and organized; in the case of archaea, by homology to eukaryotic histones, and in the case of bacteria, by histone-like proteins.
Bacterial chromosomes tend to be tethered to the plasma membrane of the bacteria. In molecular biology application, this allows for its isolation from plasmid DNA by centrifugation of lysed bacteria and pelleting of the membranes (and the attached DNA).
Prokaryotic chromosomes and plasmids are, like eukaryotic DNA, generally supercoiled. The DNA must first be released into its relaxed state for access for transcription, regulation, and replication.
Organization of DNA in a eukaryotic cell.
Chromosomes in eukaryotes are composed of chromatin fiber. Chromatin fiber is made of nucleosomes (histone octamers with part of a DNA strand attached to and wrapped around it). Chromatin fibers are packaged by proteins into a condensed structure called chromatin. Chromatin contains the vast majority of DNA and a small amount inherited maternally, can be found in the mitochondria. Chromatin is present in most cells, with a few exceptions, for example, red blood cells.
Chromatin allows the very long DNA molecules to fit into the cell nucleus. During cell division chromatin condenses further to form microscopically visible chromosomes. The structure of chromosomes varies through the cell cycle. During cellular division chromosomes are replicated, divided, and passed successfully to their daughter cells so as to ensure the genetic diversity and survival of their progeny. Chromosomes may exist as either duplicated or unduplicated. Unduplicated chromosomes are single double helixes, whereas duplicated chromosomes contain two identical copies (called chromatids or sister chromatids) joined by a centromere.
The major structures in DNA compaction: DNA
, the nucleosome
, the 10 nm "beads-on-a-string" fibre, the 30 nm fibre and the metaphase
Eukaryotes (cells with nuclei such as those found in plants, fungi, and animals) possess multiple large linear chromosomes contained in the cell's nucleus. Each chromosome has one centromere, with one or two arms projecting from the centromere, although, under most circumstances, these arms are not visible as such. In addition, most eukaryotes have a small circular mitochondrial genome, and some eukaryotes may have additional small circular or linear cytoplasmic chromosomes.
In the nuclear chromosomes of eukaryotes, the uncondensed DNA exists in a semi-ordered structure, where it is wrapped around histones (structural proteins), forming a composite material called chromatin.
During interphase (the period of the cell cycle where the cell is not dividing), two types of chromatin can be distinguished:
- Euchromatin, which consists of DNA that is active, e.g., being expressed as protein.
- Heterochromatin, which consists of mostly inactive DNA. It seems to serve structural purposes during the chromosomal stages. Heterochromatin can be further distinguished into two types:
- Constitutive heterochromatin, which is never expressed. It is located around the centromere and usually contains repetitive sequences.
- Facultative heterochromatin, which is sometimes expressed.
Structure of Eukaryotic chromosome
- Each chromosome is made up of two chromatids(chromosomal arms) which are joined to each other at a small constricted region called the centromere.(Primary constriction). These sister chromatids are conjoined twins the result of DNA replication.
- The centromere helps the chromatids attach to the spindle fibres during cell division, it is also concerned with the anaphase movement of the chromosomes, by which the spindle fibers pull the chromatids to the two opposite poles by their contraction during anaphase.
- Besides the primary constriction, in certain chromosomes there is a secondary constriction as well. Because a small portion is pinched off from the chromosomal body; this portion is called a 'satellite' and the chromosome is called an SAT chromosome.
- The two chromatids are made up of very thin chromatin fibres which are made up of 40% DNA and 60% histone proteins
- Each chromatin fibre consists of one DNA helix coiled around eight histone molecules like a loop; such a complex is called nucleosome and resembles a bead on a string. These nucleosomes pack tighter, during condensation required to get to metaphase.
- The primary constriction cannot take up most stains, so during cell division this region is a gap in staining.
- Within the primary constriction there is a clear zone called Centromere.
- The centromere with the DNA and histone proteins bound to them form a disc shaped structure called kinetochore.
- the chromonemata is a word that means a chromatid in the early stage of condensation.
Metaphase chromatin and division
In the early stages of mitosis or meiosis (cell division), the chromatin double helix become more and more condensed. They cease to function as accessible genetic material (transcription stops) and become a compact transportable form. This compact form makes the individual chromosomes visible, and they form the classic four arm structure, a pair of sister chromatids attached to each other at the centromere. The shorter arms are called p arms (from the French petit, small) and the longer arms are called q arms (q follows p in the Latin alphabet; q-g "grande"; alternatively it is sometimes said q is short for queue meaning tail in French). This is the only natural context in which individual chromosomes are visible with an optical microscope.
Mitotic metaphase chromosomes are best described by a linearly organized longitudinally compressed array of consecutive chromatin loops.
During mitosis, microtubules grow from centrosomes located at opposite ends of the cell and also attach to the centromere at specialized structures called kinetochores, one of which is present on each sister chromatid. A special DNA base sequence in the region of the kinetochores provides, along with special proteins, longer-lasting attachment in this region. The microtubules then pull the chromatids apart toward the centrosomes, so that each daughter cell inherits one set of chromatids. Once the cells have divided, the chromatids are uncoiled and DNA can again be transcribed. In spite of their appearance, chromosomes are structurally highly condensed, which enables these giant DNA structures to be contained within a cell nucleus.
Chromosomes in humans can be divided into two types: autosomes (body chromosome(s)) and allosome (sex chromosome(s)). Certain genetic traits are linked to a person's sex and are passed on through the sex chromosomes. The autosomes contain the rest of the genetic hereditary information. All act in the same way during cell division. Human cells have 23 pairs of chromosomes (22 pairs of autosomes and one pair of sex chromosomes), giving a total of 46 per cell. In addition to these, human cells have many hundreds of copies of the mitochondrial genome. Sequencing of the human genome has provided a great deal of information about each of the chromosomes. Below is a table compiling statistics for the chromosomes, based on the Sanger Institute's human genome information in the Vertebrate Genome Annotation (VEGA) database. Number of genes is an estimate, as it is in part based on gene predictions. Total chromosome length is an estimate as well, based on the estimated size of unsequenced heterochromatin regions.
Estimated number of genes and base pairs (in mega base pairs) on each human chromosome
||Total base pairs
|| % of bases
||Sequenced base pairs
|X (sex chromosome)
|Y (sex chromosome)
Number in various organisms
These tables give the total number of chromosomes (including sex chromosomes) in a cell nucleus. For example, most eukaryotes are diploid, like humans who have 22 different types of autosomes, each present as two homologous pairs, and two sex chromosomes. This gives 46 chromosomes in total. Other organisms have more than two copies of their chromosome types, such as bread wheat, which is hexaploid and has six copies of seven different chromosome types – 42 chromosomes in total.
Normal members of a particular eukaryotic species all have the same number of nuclear chromosomes (see the table). Other eukaryotic chromosomes, i.e., mitochondrial and plasmid-like small chromosomes, are much more variable in number, and there may be thousands of copies per cell.
Asexually reproducing species have one set of chromosomes that are the same in all body cells. However, asexual species can be either haploid or diploid.
Sexually reproducing species have somatic cells (body cells), which are diploid [2n] having two sets of chromosomes (23 pairs in humans with one set of 23 chromosomes from each parent), one set from the mother and one from the father. Gametes, reproductive cells, are haploid [n]: They have one set of chromosomes. Gametes are produced by meiosis of a diploid germ line cell. During meiosis, the matching chromosomes of father and mother can exchange small parts of themselves (crossover), and thus create new chromosomes that are not inherited solely from either parent. When a male and a female gamete merge (fertilization), a new diploid organism is formed.
Some animal and plant species are polyploid [Xn]: They have more than two sets of homologous chromosomes. Plants important in agriculture such as tobacco or wheat are often polyploid, compared to their ancestral species. Wheat has a haploid number of seven chromosomes, still seen in some cultivars as well as the wild progenitors. The more-common pasta and bread wheat types are polyploid, having 28 (tetraploid) and 42 (hexaploid) chromosomes, compared to the 14 (diploid) chromosomes in the wild wheat.
Prokaryote species generally have one copy of each major chromosome, but most cells can easily survive with multiple copies. For example, Buchnera, a symbiont of aphids has multiple copies of its chromosome, ranging from 10–400 copies per cell. However, in some large bacteria, such as Epulopiscium fishelsoni up to 100,000 copies of the chromosome can be present. Plasmids and plasmid-like small chromosomes are, as in eukaryotes, highly variable in copy number. The number of plasmids in the cell is almost entirely determined by the rate of division of the plasmid – fast division causes high copy number.
Karyogram of a human male
In general, the karyotype is the characteristic chromosome complement of a eukaryote species. The preparation and study of karyotypes is part of cytogenetics.
Although the replication and transcription of DNA is highly standardized in eukaryotes, the same cannot be said for their karyotypes, which are often highly variable. There may be variation between species in chromosome number and in detailed organization. In some cases, there is significant variation within species. Often there is:
- 1. variation between the two sexes
- 2. variation between the germ-line and soma (between gametes and the rest of the body)
- 3. variation between members of a population, due to balanced genetic polymorphism
- 4. geographical variation between races
- 5. mosaics or otherwise abnormal individuals.
Also, variation in karyotype may occur during development from the fertilized egg.
The technique of determining the karyotype is usually called karyotyping. Cells can be locked part-way through division (in metaphase) in vitro (in a reaction vial) with colchicine. These cells are then stained, photographed, and arranged into a karyogram, with the set of chromosomes arranged, autosomes in order of length, and sex chromosomes (here X/Y) at the end.
Like many sexually reproducing species, humans have special gonosomes (sex chromosomes, in contrast to autosomes). These are XX in females and XY in males.
Investigation into the human karyotype took many years to settle the most basic question: How many chromosomes does a normal diploid human cell contain? In 1912, Hans von Winiwarter reported 47 chromosomes in spermatogonia and 48 in oogonia, concluding an XX/XO sex determination mechanism. Painter in 1922 was not certain whether the diploid number of man is 46 or 48, at first favouring 46. He revised his opinion later from 46 to 48, and he correctly insisted on humans having an XX/XY system.
New techniques were needed to definitively solve the problem:
- Using cells in culture
- Arresting mitosis in metaphase by a solution of colchicine
- Pretreating cells in a hypotonic solution 0.075 M KCl, which swells them and spreads the chromosomes
- Squashing the preparation on the slide forcing the chromosomes into a single plane
- Cutting up a photomicrograph and arranging the result into an indisputable karyogram.
It took until 1954 before the human diploid number was confirmed as 46. Considering the techniques of Winiwarter and Painter, their results were quite remarkable. Chimpanzees, the closest living relatives to modern humans, have 48 chromosomes as do the other great apes: in humans two chromosomes fused to form chromosome 2.
(See Also: Argument from authority#Inaccurate chromosome number)
In Down syndrome, there are three copies of chromosome 21
Chromosomal aberrations are disruptions in the normal chromosomal content of a cell and are a major cause of genetic conditions in humans, such as Down syndrome, although most aberrations have little to no effect. Some chromosome abnormalities do not cause disease in carriers, such as translocations, or chromosomal inversions, although they may lead to a higher chance of bearing a child with a chromosome disorder. Abnormal numbers of chromosomes or chromosome sets, called aneuploidy, may be lethal or may give rise to genetic disorders. Genetic counseling is offered for families that may carry a chromosome rearrangement.
The gain or loss of DNA from chromosomes can lead to a variety of genetic disorders. Human examples include:
- Cri du chat, which is caused by the deletion of part of the short arm of chromosome 5. "Cri du chat" means "cry of the cat" in French; the condition was so-named because affected babies make high-pitched cries that sound like those of a cat. Affected individuals have wide-set eyes, a small head and jaw, moderate to severe mental health problems, and are very short.
- Down syndrome, the most common trisomy, usually caused by an extra copy of chromosome 21 (trisomy 21). Characteristics include decreased muscle tone, stockier build, asymmetrical skull, slanting eyes and mild to moderate developmental disability.
- Edwards syndrome, or trisomy-18, the second most common trisomy. Symptoms include motor retardation, developmental disability and numerous congenital anomalies causing serious health problems. Ninety percent of those affected die in infancy. They have characteristic clenched hands and overlapping fingers.
- Isodicentric 15, also called idic(15), partial tetrasomy 15q, or inverted duplication 15 (inv dup 15).
- Jacobsen syndrome, which is very rare. It is also called the terminal 11q deletion disorder. Those affected have normal intelligence or mild developmental disability, with poor expressive language skills. Most have a bleeding disorder called Paris-Trousseau syndrome.
- Klinefelter syndrome (XXY). Men with Klinefelter syndrome are usually sterile and tend to be taller and have longer arms and legs than their peers. Boys with the syndrome are often shy and quiet and have a higher incidence of speech delay and dyslexia. Without testosterone treatment, some may develop gynecomastia during puberty.
- Patau Syndrome, also called D-Syndrome or trisomy-13. Symptoms are somewhat similar to those of trisomy-18, without the characteristic folded hand.
- Small supernumerary marker chromosome. This means there is an extra, abnormal chromosome. Features depend on the origin of the extra genetic material. Cat-eye syndrome and isodicentric chromosome 15 syndrome (or Idic15) are both caused by a supernumerary marker chromosome, as is Pallister–Killian syndrome.
- Triple-X syndrome (XXX). XXX girls tend to be tall and thin and have a higher incidence of dyslexia.
- Turner syndrome (X instead of XX or XY). In Turner syndrome, female sexual characteristics are present but underdeveloped. Females with Turner syndrome often have a short stature, low hairline, abnormal eye features and bone development and a "caved-in" appearance to the chest.
- Wolf–Hirschhorn syndrome, which is caused by partial deletion of the short arm of chromosome 4. It is characterized by growth retardation, delayed motor skills development, "Greek Helmet" facial features, and mild to profound mental health problems.
- XYY syndrome. XYY boys are usually taller than their siblings. Like XXY boys and XXX girls, they are more likely to have learning difficulties.
Exposure of males to certain lifestyle, environmental and/or occupational hazards may increase the risk of aneuploid spermatozoa. In particular, risk of aneuploidy is increased by tobacco smoking, and occupational exposure to benzene, insecticides, and perfluorinated compounds. Increased aneuploidy is often associated with increased DNA damage in spermatozoa.
Notes and references
- ^ Hammond, Colin M.; Strømme, Caroline B.; Huang, Hongda; Patel, Dinshaw J.; Groth, Anja (2017). "Histone chaperone networks shaping chromatin function". Nature Reviews Molecular Cell Biology. 18 (3): 141–158. doi:10.1038/nrm.2016.159. ISSN 1471-0072.
- ^ Wilson, John (2002). Molecular biology of the cell : a problems approach. New York: Garland Science. ISBN 0-8153-3577-6.
- ^ a b c Schleyden, M. J. (1847). Microscopical researches into the accordance in the structure and growth of animals and plants.
- ^ Wolfram, Antonin; Neumann, Heinz (2016). "Chromosome condensation and decondensation during mitosis". Current Opinion in Cell Biology. Elsevier Ltd. 40: 19. doi:10.1016/j.ceb.2016.01.013. Retrieved 2017-11-06.
- ^ Jones, Daniel (2003) , Peter Roach, James Hartmann and Jane Setter, eds., English Pronouncing Dictionary, Cambridge: Cambridge University Press, ISBN 3-12-539683-2
- ^ "Chromosome". Merriam-Webster Dictionary.
- ^ Coxx, H. J. (1925). Biological Stains - A Handbook on the Nature and Uses of the Dyes Employed in the Biological Laboratory. Commission on Standardization of Biological Stains.
- ^ Waldeyer-Hartz (1888). "Über Karyokinese und ihre Beziehungen zu den Befruchtungsvorgängen". Archiv für mikroskopische Anatomie und Entwicklungsmechanik. 32: 27.
- ^ Garbari, Fabio; Bedini, Gianni; Peruzzi, Lorenzo (2012). "Chromosome numbers of the Italian flora. From the Caryologia foundation to present". Caryologia - International Journal of Cytology, Cytosystematics and Cytogenetics. Oxfordshire, England: Taylor & Francis. 65 (1): 65–66. doi:10.1080/00087114.2012.678090. Retrieved 2017-11-06.
- ^ Peruzzi, L.; Garbari, F.; Bedini, G. (2012). "New trends in plant cytogenetics and cytoembryology: Dedicated to the memory of Emilio Battaglia". Plant Biosystems - An International Journal Dealing. Pisa, Italy: Taylor & Francis. 146 (3): 674–675. doi:10.1080/11263504.2012.712553. Retrieved 2017-11-06.
- ^ Battaglia, Emilio (2009). "Caryoneme alternative to chromosome and a new caryological nomenclature" (PDF). Caryologia - International Journal of Cytology, Cytosystematics. Florence: Mozzon S.r.l. 62 (4): 1–80. Retrieved 2017-11-06.
- ^ Fokin S.I. (2013). "Otto Bütschli (1848–1920) Where we will genuflect?" (PDF). Protistology. 8 (1): 22–35.
- ^ Carlson, Elof A. (2004). Mendel's Legacy: The Origin of Classical Genetics (PDF). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press. p. 88. ISBN 978-087969675-7.
- ^ Wilson, E.B. (1925). The Cell in Development and Heredity, Ed. 3. Macmillan, New York. p. 923.
- ^ Mayr, E. (1982). The growth of biological thought. Harvard. p. 749.
- ^ Matthews, Robert. "The bizarre case of the chromosome that never was" (PDF). Archived from the original (PDF) on 15 December 2013. Retrieved 13 July 2013.
- ^ Thanbichler M; Shapiro L (2006). "Chromosome organization and segregation in bacteria". J. Struct. Biol. 156 (2): 292–303. doi:10.1016/j.jsb.2006.05.007. PMID 16860572.
- ^ Van Leuven, JT; Meister, RC; Simon, C; McCutcheon, JP (11 September 2014). "Sympatric speciation in a bacterial endosymbiont results in two genomes with the functionality of one". Cell. 158 (6): 1270–80. doi:10.1016/j.cell.2014.07.047. PMID 25175626.
- ^ McCutcheon, JP; von Dohlen, CD (23 August 2011). "An interdependent metabolic patchwork in the nested symbiosis of mealybugs". Current Biology. 21 (16): 1366–72. doi:10.1016/j.cub.2011.06.051. PMC 3169327 . PMID 21835622.
- ^ Han, K; Li, ZF; Peng, R; Zhu, LP; Zhou, T; Wang, LG; Li, SG; Zhang, XB; Hu, W; Wu, ZH; Qin, N; Li, YZ (2013). "Extraordinary expansion of a Sorangium cellulosum genome from an alkaline milieu". Scientific Reports. 3: 2101. doi:10.1038/srep02101. PMC 3696898 . PMID 23812535.
- ^ Hinnebusch J; Tilly K (1993). "Linear plasmids and chromosomes in bacteria". Mol Microbiol. 10 (5): 917–22. doi:10.1111/j.1365-2958.1993.tb00963.x. PMID 7934868.
- ^ Kelman LM; Kelman Z (2004). "Multiple origins of replication in archaea". Trends Microbiol. 12 (9): 399–401. doi:10.1016/j.tim.2004.07.001. PMID 15337158.
- ^ Thanbichler M; Wang SC; Shapiro L (2005). "The bacterial nucleoid: a highly organized and dynamic structure". J. Cell. Biochem. 96 (3): 506–21. doi:10.1002/jcb.20519. PMID 15988757.
- ^ Le TB, Imakaev MV, Mirny LA, Laub MT (2013). "High-resolution mapping of the spatial organization of a bacterial chromosome". Science. 342 (6159): 731–4. doi:10.1126/science.1242059. PMC 3927313 . PMID 24158908.
- ^ Sandman K; Pereira SL; Reeve JN (1998). "Diversity of prokaryotic chromosomal proteins and the origin of the nucleosome". Cell. Mol. Life Sci. 54 (12): 1350–64. doi:10.1007/s000180050259. PMID 9893710.
- ^ Sandman K; Reeve JN (2000). "Structure and functional relationships of archaeal and eukaryal histones and nucleosomes". Arch. Microbiol. 173 (3): 165–9. doi:10.1007/s002039900122. PMID 10763747.
- ^ Pereira SL; Grayling RA; Lurz R; Reeve JN (1997). "Archaeal nucleosomes". Proc. Natl. Acad. Sci. U.S.A. 94 (23): 12633–7. Bibcode:1997PNAS...9412633P. doi:10.1073/pnas.94.23.12633. PMC 25063 . PMID 9356501.
- ^ Johnson, J.; Chiu, W. (1 April 2000). "Structures of virus and virus-like particles". Current Opinion in Structural Biology. 10 (2): 229–235. doi:10.1016/S0959-440X(00)00073-7. PMID 10753814.
- ^ "Chromosome Mapping: Idiograms" Nature Education - August 13, 2013
- ^ Naumova N, Imakaev M, Fudenberg G, Zhan Y, Lajoie BR, Mirny LA, Dekker J (2013). "Organization of the mitotic chromosome". Science. 342 (6161): 948–53. doi:10.1126/science.1236083. PMC 4040465 . PMID 24200812.
- ^ Vega.sanger.ad.uk, all data in this table was derived from this database, November 11, 2008.
- ^ "Ensembl genome browser 71: Homo sapiens – Chromosome summary – Chromosome 1: 1–1,000,000". apr2013.archive.ensembl.org. Retrieved 2016-04-11.
- ^ Sequenced percentages are based on fraction of euchromatin portion, as the Human Genome Project goals called for determination of only the euchromatic portion of the genome. Telomeres, centromeres, and other heterochromatic regions have been left undetermined, as have a small number of unclonable gaps. See [www.ncbi.nlm.nih.gov] for more information on the Human Genome Project.
- ^ Armstrong SJ; Jones GH (January 2003). "Meiotic cytology and chromosome behaviour in wild-type Arabidopsis thaliana". J. Exp. Bot. 54 (380): 1–10. doi:10.1093/jxb/54.380.1. PMID 12456750.
- ^ Gill BS; Kimber G (April 1974). "The Giemsa C-Banded Karyotype of Rye". Proc. Natl. Acad. Sci. U.S.A. 71 (4): 1247–9. Bibcode:1974PNAS...71.1247G. doi:10.1073/pnas.71.4.1247. PMC 388202 . PMID 4133848.
- ^ a b c Dubcovsky J; Luo MC; Zhong GY; et al. (1996). "Genetic Map of Diploid Wheat, Triticum Monococcum L., and Its Comparison with Maps of Hordeum Vulgare L". Genetics. 143 (2): 983–99. PMC 1207354 . PMID 8725244.
- ^ Kato A; Lamb JC; Birchler JA (September 2004). "Chromosome painting using repetitive DNA sequences as probes for somatic chromosome identification in maize". Proc. Natl. Acad. Sci. U.S.A. 101 (37): 13554–9. Bibcode:2004PNAS..10113554K. doi:10.1073/pnas.0403659101. PMC 518793 . PMID 15342909.
- ^ Kenton A; Parokonny AS; Gleba YY; Bennett MD (August 1993). "Characterization of the Nicotiana tabacum L. genome by molecular cytogenetics". Mol. Gen. Genet. 240 (2): 159–69. doi:10.1007/BF00277053. PMID 8355650.
- ^ Leitch IJ; Soltis DE; Soltis PS; Bennett MD (2005). "Evolution of DNA amounts across land plants (embryophyta)". Ann. Bot. 95 (1): 207–17. doi:10.1093/aob/mci014. PMID 15596468.
- ^ Ambarish, C.N. Sridhar, K.R. (2014). "Cytological and karyological observations of two endemic pill-millipedes Arthrosphaera (Pocock, 1895) (Diplopoda: Sphaerotheriida) of the Western Ghats of India". Caryologia. 66 (1). doi:10.1080/00087114.
- ^ Vitturi R; Colomba MS; Pirrone AM; Mandrioli M (2002). "rDNA (18S-28S and 5S) colocalization and linkage between ribosomal genes and (TTAGGG)(n) telomeric sequence in the earthworm, Octodrilus complanatus (Annelida: Oligochaeta: Lumbricidae), revealed by single- and double-color FISH". J. Hered. 93 (4): 279–82. doi:10.1093/jhered/93.4.279. PMID 12407215.
- ^ Nie W; Wang J; O'Brien PC; et al. (2002). "The genome phylogeny of domestic cat, red panda and five mustelid species revealed by comparative chromosome painting and G-banding". Chromosome Res. 10 (3): 209–22. doi:10.1023/A:1015292005631. PMID 12067210.
- ^ a b Romanenko, Svetlana A.; Perelman, Polina L.; Serdukova, Natalya A.; Trifonov, Vladimir A.; Biltueva, Larisa S.; Wang, Jinhuan; Li, Tangliang; Nie, Wenhui; O'Brien, Patricia C.M.; Volobouev, Vitaly T.; Stanyon, Roscoe; Ferguson-Smith, Malcolm A.; Yang, Fengtang; Graphodatsky, Alexander S. (2006). "Reciprocal chromosome painting between three laboratory rodent species". Mammalian Genome. 17 (12): 1183–92. doi:10.1007/s00335-006-0081-z. PMID 17143584.
- ^ a b Painter, TS (1928). "A Comparison of the Chromosomes of the Rat and Mouse with Reference to the Question of Chromosome Homology in Mammals". Genetics. 13 (2): 180–9. PMC 1200977 . PMID 17246549.
- ^ Hayes, H.; Rogel-Gaillard, C.; Zijlstra, C.; De Haan, N.A.; Urien, C.; Bourgeaux, N.; Bertaud, M.; Bosma, A.A. (2002). "Establishment of an R-banded rabbit karyotype nomenclature by FISH localization of 23 chromosome-specific genes on both G- and R-banded chromosomes". Cytogenetic and Genome Research. 98 (2–3): 199–205. doi:10.1159/000069807. PMID 12698004.
- ^ "The Genetics of the Popular Aquarium Pet - Guppy Fish". Retrieved 2009-12-06.
- ^ a b De Grouchy J (1987). "Chromosome phylogenies of man, great apes, and Old World monkeys". Genetica. 73 (1–2): 37–52. doi:10.1007/bf00057436. PMID 3333352.
- ^ T.J. Robinson; F. Yang; W.R. Harrison (2002). "Chromosome painting refines the history of genome evolution in hares and rabbits (order Lagomorpha)". Cytogenetic and Genome Research. 96 (1–4): 223–227. doi:10.1159/000063034. PMID 12438803.
- ^ "section 4.W4", Rabbits, Hares and Pikas. Status Survey and Conservation Action Plan, pp. 61–94
- ^ Vitturi R; Libertini A; Sineo L; et al. (2005). "Cytogenetics of the land snails Cantareus aspersus and C. mazzullii (Mollusca: Gastropoda: Pulmonata)". Micron. 36 (4): 351–7. doi:10.1016/j.micron.2004.12.010. PMID 15857774.
- ^ Yasukochi Y; Ashakumary LA; Baba K; Yoshido A; Sahara K (2006). "A Second-Generation Integrated Map of the Silkworm Reveals Synteny and Conserved Gene Order Between Lepidopteran Insects". Genetics. 173 (3): 1319–28. doi:10.1534/genetics.106.055541. PMC 1526672 . PMID 16547103.
- ^ Houck, M.L.; Kumamoto, A.T.; Gallagher, D.S.; Benirschke, K. (2001). "Comparative cytogenetics of the African elephant (Loxodonta africana) and Asiatic elephant (Elephas maximus)". Cytogenetic and Genome Research. 93 (3–4): 249–52. doi:10.1159/000056992. PMID 11528120.
- ^ Umeko Semba; Yasuko Umeda; Yoko Shibuya; Hiroaki Okabe; Sumio Tanase & Tetsuro Yamamoto (2004). "Primary structures of guinea pig high- and low-molecular-weight kininogens". International Immunopharmacology. 4 (10–11): 1391–1400. doi:10.1016/j.intimp.2004.06.003. PMID 15313436.
- ^ Wayne RK; Ostrander EA (1999). "Origin, genetic diversity, and genome structure of the domestic dog". BioEssays. 21 (3): 247–57. doi:10.1002/(SICI)1521-1878(199903)21:3<247::AID-BIES9>3.0.CO;2-Z. PMID 10333734.
- ^ Ciudad J; Cid E; Velasco A; Lara JM; Aijón J; Orfao A (2002). "Flow cytometry measurement of the DNA contents of G0/G1 diploid cells from three different teleost fish species". Cytometry. 48 (1): 20–5. doi:10.1002/cyto.10100. PMID 12116377.
- ^ Burt DW (2002). "Origin and evolution of avian microchromosomes". Cytogenet. Genome Res. 96 (1–4): 97–112. doi:10.1159/000063018. PMID 12438785.
- ^ Itoh, Masahiro; Ikeuchi, Tatsuro; Shimba, Hachiro; Mori, Michiko; Sasaki, Motomichi; Makino, Sajiro (1969). "A Comparative Karyotype Study in Fourteen Species of Birds". The Japanese journal of genetics. 44 (3): 163–170. doi:10.1266/jjg.44.163.
- ^ Smith J; Burt DW (1998). "Parameters of the chicken genome (Gallus gallus)". Anim. Genet. 29 (4): 290–4. doi:10.1046/j.1365-2052.1998.00334.x. PMID 9745667.
- ^ Sakamura, Tetsu (1918). "Kurze Mitteilung über die Chromosomenzahlen und die Verwandtschaftsverhältnisse der Triticum-Arten". Shokubutsugaku Zasshi. 32 (379): 150–3. doi:10.15281/jplantres1887.32.379_150.
- ^ Charlebois R.L. (ed) 1999. Organization of the prokaryote genome. ASM Press, Washington DC.
- ^ Komaki K; Ishikawa H (March 2000). "Genomic copy number of intracellular bacterial symbionts of aphids varies in response to developmental stage and morph of their host". Insect Biochem. Mol. Biol. 30 (3): 253–8. doi:10.1016/S0965-1748(99)00125-3. PMID 10732993.
- ^ Mendell JE; Clements KD; Choat JH; Angert ER (May 2008). "Extreme polyploidy in a large bacterium". Proc. Natl. Acad. Sci. U.S.A. 105 (18): 6730–4. Bibcode:2008PNAS..105.6730M. doi:10.1073/pnas.0707522105. PMC 2373351 . PMID 18445653.
- ^ White, M. J. D. (1973). The chromosomes (6th ed.). London: Chapman and Hall, distributed by Halsted Press, New York. p. 28. ISBN 0-412-11930-7.
- ^ von Winiwarter H (1912). "Études sur la spermatogenèse humaine". Archives de Biologie. 27 (93): 147–9.
- ^ Painter TS (1922). "The spermatogenesis of man". Anat. Res. 23: 129.
- ^ Painter TS (1923). "Studies in mammalian spermatogenesis II. The spermatogenesis of man". J. Exp. Zoology. 37 (3): 291–336. doi:10.1002/jez.1400370303.
- ^ Tjio JH; Levan A (1956). "The chromosome number of man". Hereditas. 42 (1–2): 1–6. doi:10.1111/j.1601-5223.1956.tb03010.x. hdl:10261/15776.
- ^ Ford C.E; Hamerton J.L (1956). "The Chromosomes of Man". Nature. 178 (4541): 1020–1023. Bibcode:1956Natur.178.1020F. doi:10.1038/1781020a0. PMID 13378517.
- ^ Hsu T.C. Human and mammalian cytogenetics: a historical perspective. Springer-Verlag, N.Y. p10: "It's amazing that he [Painter] even came close!"
- ^ Santaguida, Stefano; Amon, Angelika (2015-08-01). "Short- and long-term effects of chromosome mis-segregation and aneuploidy". Nature Reviews Molecular Cell Biology. 16 (8): 473–485. doi:10.1038/nrm4025. ISSN 1471-0080. PMID 26204159.
- ^ Miller, Kenneth R. (2000). "Chapter 9-3". Biology (5th ed.). Upper Saddle River, New Jersey: Prentice Hall. pp. 194–5. ISBN 0-13-436265-9.
- ^ "What is Trisomy 18?". Trisomy 18 Foundation. Retrieved 4 February 2017.
- ^ European Chromosome 11 Network
- ^ Templado C, Uroz L, Estop A (2013). "New insights on the origin and relevance of aneuploidy in human spermatozoa". Mol. Hum. Reprod. 19 (10): 634–43. doi:10.1093/molehr/gat039. PMID 23720770.
- ^ Shi Q, Ko E, Barclay L, Hoang T, Rademaker A, Martin R (2001). "Cigarette smoking and aneuploidy in human sperm". Mol. Reprod. Dev. 59 (4): 417–21. doi:10.1002/mrd.1048. PMID 11468778.
- ^ Rubes J, Lowe X, Moore D, Perreault S, Slott V, Evenson D, Selevan SG, Wyrobek AJ (1998). "Smoking cigarettes is associated with increased sperm disomy in teenage men". Fertil. Steril. 70 (4): 715–23. doi:10.1016/S0015-0282(98)00261-1. PMID 9797104.
- ^ Xing C, Marchetti F, Li G, Weldon RH, Kurtovich E, Young S, Schmid TE, Zhang L, Rappaport S, Waidyanatha S, Wyrobek AJ, Eskenazi B (2010). "Benzene exposure near the U.S. permissible limit is associated with sperm aneuploidy". Environ. Health Perspect. 118 (6): 833–9. doi:10.1289/ehp.0901531. PMC 2898861 . PMID 20418200.
- ^ Xia Y, Bian Q, Xu L, Cheng S, Song L, Liu J, Wu W, Wang S, Wang X (2004). "Genotoxic effects on human spermatozoa among pesticide factory workers exposed to fenvalerate". Toxicology. 203 (1–3): 49–60. doi:10.1016/j.tox.2004.05.018. PMID 15363581.
- ^ Xia Y, Cheng S, Bian Q, Xu L, Collins MD, Chang HC, Song L, Liu J, Wang S, Wang X (2005). "Genotoxic effects on spermatozoa of carbaryl-exposed workers". Toxicol. Sci. 85 (1): 615–23. doi:10.1093/toxsci/kfi066. PMID 15615886.
- ^ Governini L, Guerranti C, De Leo V, Boschi L, Luddi A, Gori M, Orvieto R, Piomboni P (2015). "Chromosomal aneuploidies and DNA fragmentation of human spermatozoa from patients exposed to perfluorinated compounds". Andrologia. 47 (9): 1012–9. doi:10.1111/and.12371. PMID 25382683.