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Genomes - NCBI

Genomes

NCBI's Genome resources include information on large-scale genomics projects, genome sequences and assemblies, and mapped annotations, such as variations, markers and data from epigenomics studies.

How to

Genome Sequences

Genome
information about organisms' genomes
Assembly
genomic assembly statistics
Nucleotide
genome sequences in the Nucleotide repository
SRA
high-throughput DNA sequences
GSS
genome survey sequences
Genome BLAST
sequence search tool for genome sequences

Functional Genomics

GEO DataSets
functional genomics study data
GEO2R
identifies differentially expressed genes in GEO datasets

Variation Resources

dbSNP
catalog of short genetic variations
dbVar
genome structural variation studies
Variation Viewer
displays variations in a genomic context
1000 Genomes Browser
genome viewer for 1000 Genomes data
Variation Reporter
generates coordinate reports for genomic variants

Supporting Resources

Taxonomy
taxonomic classification and nomenclature catalog
GenBank
primary nucleotide sequence repository
RefSeq
curated, non-redundant biological sequence set
BioProject
catalog of high-throughput genome-wide studies
BioSample
sample repository for the BioProjects database
Clone
genomic and cDNA clone repository
Probe
sequence-based probe and primer repository
GRC
Genome Reference Consortium

Additional Tools

Genome Data Viewer
displays data tracks in an interactive genome browser
Genome Decoration Page
generates genome annotation graphics
Genome Workbench
displays and analyzes sequence data
PheGenl
aggregates GWAS study and related data
Primer-BLAST
designs PCR primers
ProSplign
aligns proteins to genomic DNA
ReMap
maps data between genomic assemblies
Sequence Cytogenetic Conversion Service
converts sequence and cytogenetic coordinates
Splign
aligns cDNA to genomic DNA