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Gene: Igf1 (ENSMUSG00000020053) - Summary - Mus musculus - Ensembl genome browser 89

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Gene: Igf1 ENSMUSG00000020053

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Description

insulin-like growth factor 1 [Source:MGI Symbol;Acc:MGI:96432]

Synonyms

C730016P09Rik, Igf-I, Igf-1

Location

Chromosome 10: 87,858,265-87,937,042 forward strand.

GRCm38:CM001003.2

About this gene

This gene has 8 transcripts (splice variants), 64 orthologues, 1 paralogue, is a member of 1 Ensembl protein family and is associated with 69 phenotypes.

Transcripts

Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlagsIgf1-202 ENSMUST00000095360.10 7052 153aa ENSMUSP00000093005  <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding CCDS48661 P05017 Q4VJC0 NM_001111275
NP_001104745
<p>Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&amp;c=chr14&amp;o=94517268&amp;t=94547548&amp;g=wgEncodeGencodeCompV19&amp;i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:1The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic<p>PRINCIPAL1 - APPRIS candidate principal isoform.</p><p><a class="popup" href="/Homo_sapiens/Help/Glossary?id=521">APPRIS</a> is a system to annotate alternatively spliced transcripts based on a range of computational methods.</p>APPRIS P1 Igf1-203 ENSMUST00000105300.8 1673 159aa ENSMUSP00000100937  <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding CCDS24104 Q4VJB9 NM_010512
NP_034642
<p>Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&amp;c=chr14&amp;o=94517268&amp;t=94547548&amp;g=wgEncodeGencodeCompV19&amp;i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:1The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic Igf1-207 ENSMUST00000122386.7 1391 153aa ENSMUSP00000113905  <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding CCDS48661 P05017 Q4VJC0 NM_001314010
NP_001300939
<p>Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&amp;c=chr14&amp;o=94517268&amp;t=94547548&amp;g=wgEncodeGencodeCompV19&amp;i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:1The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic<p>PRINCIPAL1 - APPRIS candidate principal isoform.</p><p><a class="popup" href="/Homo_sapiens/Help/Glossary?id=521">APPRIS</a> is a system to annotate alternatively spliced transcripts based on a range of computational methods.</p>APPRIS P1 Igf1-204 ENSMUST00000121161.7 1344 137aa ENSMUSP00000114120  <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding CCDS48663 E9Q138 NM_001111276
NP_001104746
<p>Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&amp;c=chr14&amp;o=94517268&amp;t=94547548&amp;g=wgEncodeGencodeCompV19&amp;i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:1The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic Igf1-205 ENSMUST00000121952.7 798 137aa ENSMUSP00000113177  <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding CCDS48663 E9Q138 - <p>Transcript Support Level 3, when transcripts are supported by a single EST only.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&amp;c=chr14&amp;o=94517268&amp;t=94547548&amp;g=wgEncodeGencodeCompV19&amp;i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:3The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic Igf1-206 ENSMUST00000122100.2 651 143aa ENSMUSP00000112878  <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding CCDS48662 E9PU89 NM_001111274
NP_001104744
<p>Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&amp;c=chr14&amp;o=94517268&amp;t=94547548&amp;g=wgEncodeGencodeCompV19&amp;i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:1The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic Igf1-201 ENSMUST00000062862.12 2292 165aa ENSMUSP00000056668  <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding - Q8CAR0 - <p>Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as&nbsp;suspect.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&amp;c=chr14&amp;o=94517268&amp;t=94547548&amp;g=wgEncodeGencodeCompV19&amp;i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:2The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic Igf1-208 ENSMUST00000126490.7 510 135aa ENSMUSP00000122188  <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding - D3Z7M4 - 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete<p>Transcript Support Level 3, when transcripts are supported by a single EST only.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&amp;c=chr14&amp;o=94517268&amp;t=94547548&amp;g=wgEncodeGencodeCompV19&amp;i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:3

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Summary

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Gene-based displays

    Ensembl release 89 - May 2017 © EMBL-EBI EMBL-EBI
    http://may2017.archive.ensembl.org

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